Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 Z97180.1-201ENST00000445173 988 ntBASIC19.95■□□□□ 0.78
RGPD3A6NKT7 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC19.95■□□□□ 0.78
RGPD3A6NKT7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC19.95■□□□□ 0.78
RGPD3A6NKT7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.95■□□□□ 0.78
RGPD3A6NKT7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RGPD3A6NKT7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RGPD3A6NKT7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RGPD3A6NKT7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.95■□□□□ 0.78
RGPD3A6NKT7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RGPD3A6NKT7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RGPD3A6NKT7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.95■□□□□ 0.78
RGPD3A6NKT7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 AC135983.4-201ENST00000564116 1262 ntBASIC19.94■□□□□ 0.78
RGPD3A6NKT7 AL023803.2-201ENST00000620080 638 ntBASIC19.94■□□□□ 0.78
RGPD3A6NKT7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC19.94■□□□□ 0.78
RGPD3A6NKT7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 DPM3-202ENST00000368399 517 ntBASIC19.93■□□□□ 0.78
RGPD3A6NKT7 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 AC005740.2-201ENST00000511085 419 ntBASIC19.93■□□□□ 0.78
RGPD3A6NKT7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 AC132192.2-201ENST00000596206 1147 ntBASIC19.93■□□□□ 0.78
RGPD3A6NKT7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.93■□□□□ 0.78
RGPD3A6NKT7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 AC148477.4-201ENST00000613430 1793 ntBASIC19.92■□□□□ 0.78
RGPD3A6NKT7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 AL136309.1-201ENST00000403917 691 ntBASIC19.92■□□□□ 0.78
RGPD3A6NKT7 AL391280.1-201ENST00000506969 1062 ntBASIC19.92■□□□□ 0.78
RGPD3A6NKT7 IGHV3-37-201ENST00000518544 340 ntBASIC19.92■□□□□ 0.78
RGPD3A6NKT7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.92■□□□□ 0.78
RGPD3A6NKT7 AC104581.1-202ENST00000635932 2618 ntBASIC19.91■□□□□ 0.78
RGPD3A6NKT7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 REXO1L1P-202ENST00000608646 1974 ntBASIC19.91■□□□□ 0.78
RGPD3A6NKT7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 AC026316.1-201ENST00000398900 414 ntBASIC19.91■□□□□ 0.78
RGPD3A6NKT7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 RN7SL818P-201ENST00000485099 259 ntBASIC19.91■□□□□ 0.78
RGPD3A6NKT7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 AC125604.1-201ENST00000496255 707 ntBASIC19.91■□□□□ 0.78
RGPD3A6NKT7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 RN7SL725P-201ENST00000606439 259 ntBASIC19.91■□□□□ 0.78
RGPD3A6NKT7 AL353770.1-201ENST00000614915 403 ntBASIC19.91■□□□□ 0.78
RGPD3A6NKT7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 AL805961.1-203ENST00000641078 1258 ntBASIC19.91■□□□□ 0.78
RGPD3A6NKT7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RGPD3A6NKT7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms