Protein–RNA interactions for Protein: A6NJU9

NPIPB13, Nuclear pore complex-interacting protein family member B13, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB13A6NJU9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB13A6NJU9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB13A6NJU9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB13A6NJU9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB13A6NJU9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB13A6NJU9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
NPIPB13A6NJU9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
NPIPB13A6NJU9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
NPIPB13A6NJU9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB13A6NJU9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB13A6NJU9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB13A6NJU9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 AL627223.1-201ENST00000416693 442 ntBASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 AL353705.2-201ENST00000428243 662 ntBASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 ALG1L8P-201ENST00000533887 760 ntBASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 MIR3687-2-201ENST00000577708 61 ntBASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 MIR4469-201ENST00000583919 79 ntBASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 MIR3687-1-201ENST00000614492 61 ntBASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB13A6NJU9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 AC004461.1-201ENST00000412461 403 ntBASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 KRT18P32-201ENST00000424695 1287 ntBASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 AC005237.2-201ENST00000434368 219 ntBASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 TMBIM7P-203ENST00000641617 1718 ntBASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB13A6NJU9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms