Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 BX664615.1-201ENST00000443558 458 ntBASIC11.41□□□□□ -0.58
LINC01546A6NGU7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 ABCD1P5-201ENST00000445663 754 ntBASIC11.41□□□□□ -0.58
LINC01546A6NGU7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 AC139887.4-201ENST00000607877 719 ntBASIC11.41□□□□□ -0.58
LINC01546A6NGU7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 AC092135.3-201ENST00000624151 1846 ntBASIC11.41□□□□□ -0.58
LINC01546A6NGU7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC01546A6NGU7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 AC027601.5-201ENST00000624065 2482 ntBASIC11.4□□□□□ -0.58
LINC01546A6NGU7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 AL645929.1-201ENST00000420084 975 ntBASIC11.4□□□□□ -0.58
LINC01546A6NGU7 LIN28AP1-201ENST00000429574 405 ntBASIC11.4□□□□□ -0.58
LINC01546A6NGU7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 AC093724.1-201ENST00000448659 1027 ntBASIC11.4□□□□□ -0.58
LINC01546A6NGU7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 AC010203.1-204ENST00000548782 407 ntBASIC11.4□□□□□ -0.58
LINC01546A6NGU7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01546A6NGU7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01546A6NGU7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01546A6NGU7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01546A6NGU7 WASH3P-207ENST00000560956 1394 ntBASIC11.4□□□□□ -0.59
LINC01546A6NGU7 FO538757.1-201ENST00000623083 1397 ntBASIC11.4□□□□□ -0.59
LINC01546A6NGU7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01546A6NGU7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01546A6NGU7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.4□□□□□ -0.59
LINC01546A6NGU7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01546A6NGU7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01546A6NGU7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01546A6NGU7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01546A6NGU7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01546A6NGU7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01546A6NGU7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms