Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 AC036164.1-201ENST00000570544 333 ntBASIC14.11□□□□□ -0.15
MBD3L3A6NE82 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 AL158212.4-201ENST00000624062 1286 ntBASIC14.11□□□□□ -0.15
MBD3L3A6NE82 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 REXO1L1P-202ENST00000608646 1974 ntBASIC14.11□□□□□ -0.15
MBD3L3A6NE82 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.11□□□□□ -0.15
MBD3L3A6NE82 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 AC136604.1-201ENST00000418535 575 ntBASIC14.1□□□□□ -0.15
MBD3L3A6NE82 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 RN7SL399P-201ENST00000471648 279 ntBASIC14.1□□□□□ -0.15
MBD3L3A6NE82 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 AL450472.2-201ENST00000603663 1156 ntBASIC14.1□□□□□ -0.15
MBD3L3A6NE82 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 CLK3P2-201ENST00000427566 1453 ntBASIC14.1□□□□□ -0.15
MBD3L3A6NE82 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
MBD3L3A6NE82 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 TOMM22P5-201ENST00000416399 439 ntBASIC14.09□□□□□ -0.15
MBD3L3A6NE82 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 RN7SL837P-201ENST00000463010 287 ntBASIC14.09□□□□□ -0.15
MBD3L3A6NE82 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 AC092552.1-201ENST00000547243 906 ntBASIC14.09□□□□□ -0.15
MBD3L3A6NE82 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 AC132938.2-201ENST00000579188 680 ntBASIC14.09□□□□□ -0.15
MBD3L3A6NE82 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms