Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 ELK2BP-201ENST00000415014 1224 ntBASIC14.13□□□□□ -0.15
SHISA3A0PJX4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 AP000867.3-201ENST00000524675 377 ntBASIC14.13□□□□□ -0.15
SHISA3A0PJX4 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 AC139887.3-201ENST00000568585 713 ntBASIC14.13□□□□□ -0.15
SHISA3A0PJX4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 AC116407.4-201ENST00000623319 1061 ntBASIC14.13□□□□□ -0.15
SHISA3A0PJX4 AL139288.1-201ENST00000623748 933 ntBASIC14.13□□□□□ -0.15
SHISA3A0PJX4 AL805961.1-202ENST00000641562 540 ntBASIC14.13□□□□□ -0.15
SHISA3A0PJX4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SHISA3A0PJX4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.12□□□□□ -0.15
SHISA3A0PJX4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 KRT8P44-201ENST00000441609 1350 ntBASIC14.12□□□□□ -0.15
SHISA3A0PJX4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 AC087388.1-201ENST00000571370 1112 ntBASIC14.12□□□□□ -0.15
SHISA3A0PJX4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.12□□□□□ -0.15
SHISA3A0PJX4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms