Protein–RNA interactions for Protein: Q9Y2Q0

ATP8A1, Phospholipid-transporting ATPase IA, humanhuman

Predictions only

Length 1,164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP8A1Q9Y2Q0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 CXCL1P1-201ENST00000502804 216 ntBASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 AC040169.1-201ENST00000565382 521 ntBASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 AC023511.2-201ENST00000618803 211 ntBASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 AC010507.1-201ENST00000633895 436 ntBASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP8A1Q9Y2Q0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 AC022532.1-201ENST00000624563 1728 ntBASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 AC096734.2-201ENST00000562054 433 ntBASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 AC018845.2-201ENST00000568326 409 ntBASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 CDC14C-201ENST00000428251 1719 ntBASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP8A1Q9Y2Q0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 LINC02447-202ENST00000501888 2146 ntBASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP8A1Q9Y2Q0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms