Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN2Q9UHD9 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBQLN2Q9UHD9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBQLN2Q9UHD9 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
UBQLN2Q9UHD9 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.77□□□□□ -0.2
UBQLN2Q9UHD9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBQLN2Q9UHD9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 STARP1-201ENST00000397973 869 ntBASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 FAM8A6P-201ENST00000407496 1135 ntBASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 AC092597.1-201ENST00000487352 616 ntBASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 MIR3917-201ENST00000580971 93 ntBASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN2Q9UHD9 AC006504.5-208ENST00000588784 2401 ntBASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBQLN2Q9UHD9 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBQLN2Q9UHD9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms