Protein–RNA interactions for Protein: Q9NYR8

RDH8, Retinol dehydrogenase 8, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH8Q9NYR8 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RDH8Q9NYR8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RDH8Q9NYR8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RDH8Q9NYR8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.08□□□□□ -0.15
RDH8Q9NYR8 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
RDH8Q9NYR8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 AC092329.2-201ENST00000598402 547 ntBASIC14.08□□□□□ -0.16
RDH8Q9NYR8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 AL590326.2-201ENST00000625139 305 ntBASIC14.08□□□□□ -0.16
RDH8Q9NYR8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 AC007292.2-201ENST00000593524 1812 ntBASIC14.08□□□□□ -0.16
RDH8Q9NYR8 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 AC004817.3-201ENST00000602957 2129 ntBASIC14.08□□□□□ -0.16
RDH8Q9NYR8 AL021920.2-201ENST00000624828 1351 ntBASIC14.08□□□□□ -0.16
RDH8Q9NYR8 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RDH8Q9NYR8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 SIGLEC16-201ENST00000599858 1437 ntBASIC14.07□□□□□ -0.16
RDH8Q9NYR8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 PPT1-215ENST00000641471 2368 ntBASIC14.07□□□□□ -0.16
RDH8Q9NYR8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RDH8Q9NYR8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RDH8Q9NYR8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RDH8Q9NYR8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RDH8Q9NYR8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms