Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.69■□□□□ 0.26
HCFC1R1Q9NWW0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1R1Q9NWW0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 AC080080.1-201ENST00000625121 2420 ntBASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 KRT18P64-201ENST00000434946 1219 ntBASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 KRT223P-202ENST00000449164 1292 ntBASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 AC036164.1-201ENST00000570544 333 ntBASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 AC015936.2-201ENST00000593177 259 ntBASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 AC106886.4-201ENST00000623557 2502 ntBASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.68■□□□□ 0.26
HCFC1R1Q9NWW0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 AC018665.1-201ENST00000622927 1362 ntBASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 AC133552.6-201ENST00000613406 534 ntBASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 PKD1P1-201ENST00000458669 6805 ntBASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.67■□□□□ 0.26
HCFC1R1Q9NWW0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 AC245100.5-201ENST00000452108 331 ntBASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 BNIP3P42-201ENST00000454982 569 ntBASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 AP005482.1-201ENST00000563722 1273 ntBASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 BTNL10-201ENST00000595971 695 ntBASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 BNIP3P29-201ENST00000598302 571 ntBASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 AC011447.5-201ENST00000616168 564 ntBASIC16.66■□□□□ 0.26
HCFC1R1Q9NWW0 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms