Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 AL031432.2-201ENST00000566714 459 ntBASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 AL928711.1-201ENST00000570165 459 ntBASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 AC020765.3-201ENST00000613051 740 ntBASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 AC007064.4-201ENST00000637740 555 ntBASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 AL645728.2-201ENST00000641974 660 ntBASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 BCAR1-209ENST00000546196 1340 ntBASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 MED15P5-201ENST00000423150 992 ntBASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 CDC14C-201ENST00000428251 1719 ntBASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 AC140113.2-201ENST00000604370 208 ntBASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 AC023141.13-201ENST00000604991 943 ntBASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 AC027601.4-201ENST00000611259 610 ntBASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 AC004877.2-201ENST00000623941 599 ntBASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 LINC02447-202ENST00000501888 2146 ntBASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTPS2Q9NRF8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.12■□□□□ 0.01
CTPS2Q9NRF8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTPS2Q9NRF8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.12■□□□□ 0.01
CTPS2Q9NRF8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTPS2Q9NRF8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTPS2Q9NRF8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.12■□□□□ 0.01
CTPS2Q9NRF8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.12■□□□□ 0.01
CTPS2Q9NRF8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTPS2Q9NRF8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms