Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 EMBP1-201ENST00000458200 901 ntBASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 MIR4751-201ENST00000578027 74 ntBASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 MIR4313-201ENST00000580760 101 ntBASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 KRT8P44-201ENST00000441609 1350 ntBASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 WASH6P-202ENST00000359512 1437 ntBASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC52A3Q9NQ40 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 AC009947.1-201ENST00000444350 727 ntBASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 AC096734.2-201ENST00000562054 433 ntBASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 AL049840.3-201ENST00000602669 611 ntBASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 AC010507.1-201ENST00000633895 436 ntBASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SLC52A3Q9NQ40 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC52A3Q9NQ40 RPS2P28-201ENST00000314255 741 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms