Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 AC114501.2-201ENST00000439631 535 ntBASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 AC243562.2-201ENST00000561247 970 ntBASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 AL139384.1-201ENST00000612143 3047 ntBASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 TARDBPP1-201ENST00000442013 1203 ntBASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 AC140912.1-201ENST00000577171 1054 ntBASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 SRD5A3P1-201ENST00000603021 949 ntBASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.31□□□□□ -0.12
KIAA1549Q9HCM3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 TPRX2P-201ENST00000535362 881 ntBASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KIAA1549Q9HCM3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 RN7SL837P-201ENST00000463010 287 ntBASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KIAA1549Q9HCM3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms