Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 AP002472.1-201ENST00000577490 586 ntBASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.35■□□□□ 0.69
UPF3BQ9BZI7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 AC073347.1-201ENST00000421633 2643 ntBASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 AC074386.1-202ENST00000463561 864 ntBASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 AC099522.2-201ENST00000607001 744 ntBASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 AL589702.1-201ENST00000641229 1509 ntBASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 WASH6P-202ENST00000359512 1437 ntBASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPF3BQ9BZI7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
UPF3BQ9BZI7 UPF3AP3-201ENST00000420996 769 ntBASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UPF3BQ9BZI7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms