Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 ZNF259P1-201ENST00000407656 1365 ntBASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 TMBIM7P-203ENST00000641617 1718 ntBASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 AL671277.1-201ENST00000429656 993 ntBASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 AC112191.1-201ENST00000523689 701 ntBASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 AL671883.3-201ENST00000603274 991 ntBASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 AKAP8P1-201ENST00000434743 1349 ntBASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO3Q9BXY4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 AL591424.1-201ENST00000442569 1213 ntBASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 RNA5SP416-201ENST00000516838 111 ntBASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 AC105233.2-201ENST00000523697 349 ntBASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 AF228730.5-201ENST00000530288 346 ntBASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 AC008267.7-201ENST00000624570 1194 ntBASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms