Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.32■□□□□ 0.2
NDNQ99608 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.32■□□□□ 0.2
NDNQ99608 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NDNQ99608 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.32■□□□□ 0.2
NDNQ99608 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.32■□□□□ 0.2
NDNQ99608 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
NDNQ99608 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.32■□□□□ 0.2
NDNQ99608 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
NDNQ99608 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.32■□□□□ 0.2
NDNQ99608 RPL13AP23-201ENST00000480739 586 ntBASIC16.32■□□□□ 0.2
NDNQ99608 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NDNQ99608 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.32■□□□□ 0.2
NDNQ99608 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDNQ99608 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.32■□□□□ 0.2
NDNQ99608 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDNQ99608 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDNQ99608 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.32■□□□□ 0.2
NDNQ99608 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.32■□□□□ 0.2
NDNQ99608 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NDNQ99608 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.32■□□□□ 0.2
NDNQ99608 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.32■□□□□ 0.2
NDNQ99608 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.32■□□□□ 0.2
NDNQ99608 MIR3909-201ENST00000579518 119 ntBASIC16.32■□□□□ 0.2
NDNQ99608 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.32■□□□□ 0.2
NDNQ99608 FAM45BP-202ENST00000592932 1624 ntBASIC16.32■□□□□ 0.2
NDNQ99608 AL009183.1-201ENST00000603760 355 ntBASIC16.32■□□□□ 0.2
NDNQ99608 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NDNQ99608 AC004877.2-201ENST00000623941 599 ntBASIC16.32■□□□□ 0.2
NDNQ99608 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.32■□□□□ 0.2
NDNQ99608 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NDNQ99608 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDNQ99608 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDNQ99608 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDNQ99608 CICP4-201ENST00000447359 2812 ntBASIC16.32■□□□□ 0.2
NDNQ99608 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDNQ99608 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDNQ99608 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.31■□□□□ 0.2
NDNQ99608 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NDNQ99608 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.31■□□□□ 0.2
NDNQ99608 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NDNQ99608 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.31■□□□□ 0.2
NDNQ99608 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NDNQ99608 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
NDNQ99608 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 IL9RP2-201ENST00000423948 1312 ntBASIC16.31■□□□□ 0.2
NDNQ99608 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NDNQ99608 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NDNQ99608 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.31■□□□□ 0.2
NDNQ99608 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.31■□□□□ 0.2
NDNQ99608 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.31■□□□□ 0.2
NDNQ99608 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.31■□□□□ 0.2
NDNQ99608 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.31■□□□□ 0.2
NDNQ99608 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.31■□□□□ 0.2
NDNQ99608 AC145285.3-201ENST00000564603 959 ntBASIC16.31■□□□□ 0.2
NDNQ99608 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.31■□□□□ 0.2
NDNQ99608 AC007064.4-201ENST00000637740 555 ntBASIC16.31■□□□□ 0.2
NDNQ99608 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
NDNQ99608 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.31■□□□□ 0.2
NDNQ99608 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.31■□□□□ 0.2
NDNQ99608 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 AP003680.1-201ENST00000598970 3660 ntBASIC16.31■□□□□ 0.2
NDNQ99608 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NDNQ99608 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDNQ99608 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.31■□□□□ 0.2
NDNQ99608 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDNQ99608 PRAL-201ENST00000624952 3286 ntBASIC16.3■□□□□ 0.2
NDNQ99608 AC092919.2-201ENST00000623631 1645 ntBASIC16.3■□□□□ 0.2
NDNQ99608 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDNQ99608 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDNQ99608 AL592424.1-201ENST00000563624 1536 ntBASIC16.3■□□□□ 0.2
NDNQ99608 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.3■□□□□ 0.2
NDNQ99608 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.3■□□□□ 0.2
NDNQ99608 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.3■□□□□ 0.2
NDNQ99608 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDNQ99608 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDNQ99608 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDNQ99608 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.3■□□□□ 0.2
NDNQ99608 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NDNQ99608 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NDNQ99608 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDNQ99608 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
NDNQ99608 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDNQ99608 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.3■□□□□ 0.2
NDNQ99608 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.3■□□□□ 0.2
NDNQ99608 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms