Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 KRT8P29-201ENST00000420409 1371 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC090857.1-201ENST00000527400 390 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC073413.1-201ENST00000603927 732 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AL023803.2-201ENST00000620080 638 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 ZNF436-AS1-201ENST00000335648 2547 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 FRMD8P1-201ENST00000440433 1524 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 RBM4-207ENST00000506523 654 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC008805.1-201ENST00000590892 364 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC124947.2-201ENST00000547118 1133 ntBASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HMCN1Q96RW7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 SRP14-204ENST00000558720 780 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 NAV1-210ENST00000593583 726 ntBASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms