Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPRD1AQ96P16 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 AC245100.5-201ENST00000452108 331 ntBASIC16.68■□□□□ 0.26
RPRD1AQ96P16 AL139010.1-201ENST00000454878 894 ntBASIC16.68■□□□□ 0.26
RPRD1AQ96P16 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 AL158211.3-201ENST00000607385 239 ntBASIC16.68■□□□□ 0.26
RPRD1AQ96P16 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RPRD1AQ96P16 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 MIR770-201ENST00000390219 98 ntBASIC16.67■□□□□ 0.26
RPRD1AQ96P16 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 AL589739.1-201ENST00000607720 493 ntBASIC16.67■□□□□ 0.26
RPRD1AQ96P16 AC073592.8-201ENST00000624126 511 ntBASIC16.67■□□□□ 0.26
RPRD1AQ96P16 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 PCDHB19P-201ENST00000570871 2371 ntBASIC16.67■□□□□ 0.26
RPRD1AQ96P16 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.67■□□□□ 0.26
RPRD1AQ96P16 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 FER1L4-210ENST00000615531 5998 ntBASIC16.66■□□□□ 0.26
RPRD1AQ96P16 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms