Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 AL080243.2-201ENST00000418783 582 ntBASIC13.19□□□□□ -0.3
ZNF48Q96MX3 RN7SL692P-201ENST00000464677 288 ntBASIC13.19□□□□□ -0.3
ZNF48Q96MX3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 AL079307.3-201ENST00000556114 283 ntBASIC13.19□□□□□ -0.3
ZNF48Q96MX3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 AC004840.1-201ENST00000636359 365 ntBASIC13.19□□□□□ -0.3
ZNF48Q96MX3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 AL122018.1-201ENST00000446607 2310 ntBASIC13.19□□□□□ -0.3
ZNF48Q96MX3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 AL512652.2-201ENST00000625156 1716 ntBASIC13.19□□□□□ -0.3
ZNF48Q96MX3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ZNF48Q96MX3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 NME2P1-201ENST00000426182 414 ntBASIC13.18□□□□□ -0.3
ZNF48Q96MX3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF48Q96MX3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms