Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 AC012569.1-201ENST00000591191 1524 ntBASIC15.63■□□□□ 0.09
VPS33AQ96AX1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.63■□□□□ 0.09
VPS33AQ96AX1 RPS2P1-201ENST00000434010 821 ntBASIC15.63■□□□□ 0.09
VPS33AQ96AX1 SAPCD2P3-201ENST00000455031 850 ntBASIC15.63■□□□□ 0.09
VPS33AQ96AX1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 AC136632.2-201ENST00000512891 861 ntBASIC15.63■□□□□ 0.09
VPS33AQ96AX1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
VPS33AQ96AX1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 AC136621.1-201ENST00000624017 2304 ntBASIC15.62■□□□□ 0.09
VPS33AQ96AX1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 TNRC18P2-201ENST00000417666 2714 ntBASIC15.62■□□□□ 0.09
VPS33AQ96AX1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 AL160237.2-201ENST00000556165 472 ntBASIC15.62■□□□□ 0.09
VPS33AQ96AX1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 AC008667.4-201ENST00000607370 168 ntBASIC15.62■□□□□ 0.09
VPS33AQ96AX1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS33AQ96AX1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 AC092919.2-201ENST00000623631 1645 ntBASIC15.61■□□□□ 0.09
VPS33AQ96AX1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms