Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 MTHFR-217ENST00000641820 1569 ntBASIC16.05■□□□□ 0.16
SCAMP4Q969E2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 HLA-V-204ENST00000476601 1289 ntBASIC16.05■□□□□ 0.16
SCAMP4Q969E2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAMP4Q969E2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 AL691432.1-201ENST00000596308 1422 ntBASIC16.04■□□□□ 0.16
SCAMP4Q969E2 AC100757.3-201ENST00000622361 1406 ntBASIC16.04■□□□□ 0.16
SCAMP4Q969E2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 AC245100.5-201ENST00000452108 331 ntBASIC16.04■□□□□ 0.16
SCAMP4Q969E2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 AL590560.3-201ENST00000623350 461 ntBASIC16.04■□□□□ 0.16
SCAMP4Q969E2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 CYP4F24P-201ENST00000586049 1580 ntBASIC16.04■□□□□ 0.16
SCAMP4Q969E2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SCAMP4Q969E2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.04■□□□□ 0.16
SCAMP4Q969E2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms