Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC24.66■■□□□ 1.54
CCNB3Q8WWL7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC24.66■■□□□ 1.54
CCNB3Q8WWL7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
CCNB3Q8WWL7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
CCNB3Q8WWL7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCNB3Q8WWL7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 AL662844.4-201ENST00000606367 2838 ntBASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 AC006449.5-201ENST00000610658 2098 ntBASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 AC004987.2-201ENST00000395959 1148 ntBASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 SNX29P1-201ENST00000548357 1007 ntBASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCNB3Q8WWL7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCNB3Q8WWL7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CCNB3Q8WWL7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCNB3Q8WWL7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
CCNB3Q8WWL7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCNB3Q8WWL7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC24.64■■□□□ 1.54
CCNB3Q8WWL7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCNB3Q8WWL7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCNB3Q8WWL7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC24.64■■□□□ 1.54
CCNB3Q8WWL7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCNB3Q8WWL7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
CCNB3Q8WWL7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CCNB3Q8WWL7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 AC099398.1-201ENST00000567919 2776 ntBASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 AC074338.1-201ENST00000416825 156 ntBASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC24.63■■□□□ 1.53
CCNB3Q8WWL7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms