Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 FAM197Y8-203ENST00000450145 560 ntBASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC44A1Q8WWI5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 AC090616.6-203ENST00000579186 1945 ntBASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 KRT18P34-201ENST00000488218 1270 ntBASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC44A1Q8WWI5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 AP001282.1-201ENST00000531301 1499 ntBASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 RPS2P28-201ENST00000314255 741 ntBASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms