Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.21■□□□□ 0.18
CHD5Q8TDI0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHD5Q8TDI0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.21■□□□□ 0.18
CHD5Q8TDI0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHD5Q8TDI0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.18
CHD5Q8TDI0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.21■□□□□ 0.18
CHD5Q8TDI0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.21■□□□□ 0.18
CHD5Q8TDI0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.21■□□□□ 0.18
CHD5Q8TDI0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHD5Q8TDI0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 CRB3P1-201ENST00000449338 276 ntBASIC16.2■□□□□ 0.18
CHD5Q8TDI0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 LINC02560-201ENST00000596379 459 ntBASIC16.2■□□□□ 0.18
CHD5Q8TDI0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 SERBP1P5-201ENST00000510079 1181 ntBASIC16.2■□□□□ 0.18
CHD5Q8TDI0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 WASH4P-201ENST00000564273 1246 ntBASIC16.2■□□□□ 0.18
CHD5Q8TDI0 MIR4313-201ENST00000580760 101 ntBASIC16.2■□□□□ 0.18
CHD5Q8TDI0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD5Q8TDI0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 KRT18P64-201ENST00000434946 1219 ntBASIC16.19■□□□□ 0.18
CHD5Q8TDI0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 AL132655.2-201ENST00000596276 594 ntBASIC16.19■□□□□ 0.18
CHD5Q8TDI0 SRD5A3P1-201ENST00000603021 949 ntBASIC16.19■□□□□ 0.18
CHD5Q8TDI0 AC074044.1-201ENST00000609673 707 ntBASIC16.19■□□□□ 0.18
CHD5Q8TDI0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
CHD5Q8TDI0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 AF228730.6-201ENST00000641497 218 ntBASIC16.18■□□□□ 0.18
CHD5Q8TDI0 AC084121.3-201ENST00000641716 218 ntBASIC16.18■□□□□ 0.18
CHD5Q8TDI0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms