Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 FAM220BP-201ENST00000377689 816 ntBASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 AC142381.1-201ENST00000426099 345 ntBASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 AC022145.2-201ENST00000598203 171 ntBASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 AL513210.1-201ENST00000629608 234 ntBASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SRFBP1Q8NEF9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 HLA-H-201ENST00000383620 1096 ntBASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 KRT18P13-201ENST00000400056 1290 ntBASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 AC005237.2-201ENST00000434368 219 ntBASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 AC004835.2-201ENST00000603762 682 ntBASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 AC026691.1-201ENST00000602502 2017 ntBASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRFBP1Q8NEF9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms