Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 YBX1P5-201ENST00000509441 847 ntBASIC16.71■□□□□ 0.27
PAF1Q8N7H5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 GPAA1P2-202ENST00000606848 1787 ntBASIC16.71■□□□□ 0.27
PAF1Q8N7H5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.71■□□□□ 0.27
PAF1Q8N7H5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
PAF1Q8N7H5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
PAF1Q8N7H5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 TSPY26P-202ENST00000565928 3884 ntBASIC16.7■□□□□ 0.26
PAF1Q8N7H5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 PCGF3-213ENST00000620529 1899 ntBASIC16.7■□□□□ 0.26
PAF1Q8N7H5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 SNX33P1-201ENST00000592116 1762 ntBASIC16.7■□□□□ 0.26
PAF1Q8N7H5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 AC254562.1-201ENST00000417586 456 ntBASIC16.7■□□□□ 0.26
PAF1Q8N7H5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 AC079140.1-201ENST00000508039 487 ntBASIC16.7■□□□□ 0.26
PAF1Q8N7H5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 KRT8P48-201ENST00000515599 1220 ntBASIC16.7■□□□□ 0.26
PAF1Q8N7H5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.7■□□□□ 0.26
PAF1Q8N7H5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 KRT18P32-201ENST00000424695 1287 ntBASIC16.69■□□□□ 0.26
PAF1Q8N7H5 AP000344.2-201ENST00000512987 629 ntBASIC16.69■□□□□ 0.26
PAF1Q8N7H5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.69■□□□□ 0.26
PAF1Q8N7H5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms