Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.23■□□□□ 0.03
ARHGEF39Q8N4T4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ARHGEF39Q8N4T4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARHGEF39Q8N4T4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.23■□□□□ 0.03
ARHGEF39Q8N4T4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ARHGEF39Q8N4T4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ARHGEF39Q8N4T4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ARHGEF39Q8N4T4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARHGEF39Q8N4T4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.23■□□□□ 0.03
ARHGEF39Q8N4T4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARHGEF39Q8N4T4 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 FO393414.2-201ENST00000405153 598 ntBASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 AC011467.4-201ENST00000594891 528 ntBASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 AL033527.5-202ENST00000641632 1098 ntBASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 AC069224.1-201ENST00000566372 1715 ntBASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
ARHGEF39Q8N4T4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 AC022144.1-201ENST00000602255 1580 ntBASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 KRT8P37-201ENST00000451609 1420 ntBASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF39Q8N4T4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARHGEF39Q8N4T4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
ARHGEF39Q8N4T4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARHGEF39Q8N4T4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.21■□□□□ 0.02
ARHGEF39Q8N4T4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.21■□□□□ 0.02
ARHGEF39Q8N4T4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms