Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SCML4Q8N228 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.76■□□□□ 0.27
SCML4Q8N228 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.76■□□□□ 0.27
SCML4Q8N228 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.76■□□□□ 0.27
SCML4Q8N228 PHKG1P2-201ENST00000457537 863 ntBASIC16.76■□□□□ 0.27
SCML4Q8N228 RN7SL618P-201ENST00000477850 296 ntBASIC16.76■□□□□ 0.27
SCML4Q8N228 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.76■□□□□ 0.27
SCML4Q8N228 SPCS2P1-201ENST00000561636 679 ntBASIC16.76■□□□□ 0.27
SCML4Q8N228 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.76■□□□□ 0.27
SCML4Q8N228 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.76■□□□□ 0.27
SCML4Q8N228 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.76■□□□□ 0.27
SCML4Q8N228 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
SCML4Q8N228 AJ011932.1-201ENST00000621707 465 ntBASIC16.76■□□□□ 0.27
SCML4Q8N228 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SCML4Q8N228 REXO1L1P-202ENST00000608646 1974 ntBASIC16.76■□□□□ 0.27
SCML4Q8N228 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.76■□□□□ 0.27
SCML4Q8N228 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.76■□□□□ 0.27
SCML4Q8N228 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.75■□□□□ 0.27
SCML4Q8N228 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.75■□□□□ 0.27
SCML4Q8N228 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.75■□□□□ 0.27
SCML4Q8N228 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SCML4Q8N228 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.75■□□□□ 0.27
SCML4Q8N228 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.75■□□□□ 0.27
SCML4Q8N228 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.75■□□□□ 0.27
SCML4Q8N228 AC112504.1-201ENST00000623415 1841 ntBASIC16.75■□□□□ 0.27
SCML4Q8N228 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.75■□□□□ 0.27
SCML4Q8N228 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
SCML4Q8N228 BTBD7P1-201ENST00000447253 1453 ntBASIC16.75■□□□□ 0.27
SCML4Q8N228 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SCML4Q8N228 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.75■□□□□ 0.27
SCML4Q8N228 LINC02447-202ENST00000501888 2146 ntBASIC16.75■□□□□ 0.27
SCML4Q8N228 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.75■□□□□ 0.27
SCML4Q8N228 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SCML4Q8N228 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.75■□□□□ 0.27
SCML4Q8N228 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.75■□□□□ 0.27
SCML4Q8N228 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 AZGP1P1-201ENST00000411909 902 ntBASIC16.75■□□□□ 0.27
SCML4Q8N228 HMGN1P19-201ENST00000436976 333 ntBASIC16.75■□□□□ 0.27
SCML4Q8N228 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.75■□□□□ 0.27
SCML4Q8N228 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.75■□□□□ 0.27
SCML4Q8N228 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.75■□□□□ 0.27
SCML4Q8N228 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.75■□□□□ 0.27
SCML4Q8N228 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.75■□□□□ 0.27
SCML4Q8N228 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.75■□□□□ 0.27
SCML4Q8N228 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.75■□□□□ 0.27
SCML4Q8N228 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 AC022144.1-201ENST00000602255 1580 ntBASIC16.75■□□□□ 0.27
SCML4Q8N228 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.75■□□□□ 0.27
SCML4Q8N228 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SCML4Q8N228 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.75■□□□□ 0.27
SCML4Q8N228 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SCML4Q8N228 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCML4Q8N228 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.75■□□□□ 0.27
SCML4Q8N228 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.74■□□□□ 0.27
SCML4Q8N228 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.74■□□□□ 0.27
SCML4Q8N228 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
SCML4Q8N228 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 AC026691.1-201ENST00000602502 2017 ntBASIC16.74■□□□□ 0.27
SCML4Q8N228 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SCML4Q8N228 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.74■□□□□ 0.27
SCML4Q8N228 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.74■□□□□ 0.27
SCML4Q8N228 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.74■□□□□ 0.27
SCML4Q8N228 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.74■□□□□ 0.27
SCML4Q8N228 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.74■□□□□ 0.27
SCML4Q8N228 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.74■□□□□ 0.27
SCML4Q8N228 SDHAP3-202ENST00000515467 728 ntBASIC16.74■□□□□ 0.27
SCML4Q8N228 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.74■□□□□ 0.27
SCML4Q8N228 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.74■□□□□ 0.27
SCML4Q8N228 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.74■□□□□ 0.27
SCML4Q8N228 AC009407.1-201ENST00000568958 598 ntBASIC16.74■□□□□ 0.27
SCML4Q8N228 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms