Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 MIR1202-201ENST00000408529 83 ntBASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 AP001582.1-201ENST00000525856 295 ntBASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 AC103810.3-201ENST00000583567 96 ntBASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 ACTG1P17-201ENST00000558391 1119 ntBASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 AL008638.5-201ENST00000623814 1298 ntBASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 AC106886.4-201ENST00000623557 2502 ntBASIC14.91□□□□□ -0.02
COL27A1Q8IZC6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 AC022188.1-201ENST00000620960 1664 ntBASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 AC104306.2-201ENST00000451877 341 ntBASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms