Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 AL513480.1-201ENST00000451731 511 ntBASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 AL773604.1-201ENST00000617417 272 ntBASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 AL691432.3-201ENST00000621860 400 ntBASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 AC006058.4-201ENST00000624016 1670 ntBASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 RNU1-129P-201ENST00000384064 167 ntBASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AL160237.2-201ENST00000556165 472 ntBASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 U1.21-201ENST00000580816 167 ntBASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AL049840.3-201ENST00000602669 611 ntBASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AL031055.1-201ENST00000606362 631 ntBASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AC021097.1-201ENST00000607902 574 ntBASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AL031008.1-201ENST00000619963 541 ntBASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC50Q8IVM0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC50Q8IVM0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms