Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 AC136759.1-202ENST00000530858 2194 ntBASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.75□□□□□ -0.05
CROCCP3Q8IVE0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 AC027612.1-201ENST00000445234 2395 ntBASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 ECEL1P3-201ENST00000427961 737 ntBASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 GCSHP2-201ENST00000560971 527 ntBASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 AC013467.2-201ENST00000605472 835 ntBASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 AC079602.3-201ENST00000623931 403 ntBASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CROCCP3Q8IVE0 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms