Protein–RNA interactions for Protein: Q8IV35

WDR49, WD repeat-containing protein 49, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR49Q8IV35 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
WDR49Q8IV35 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
WDR49Q8IV35 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.37■□□□□ 0.37
WDR49Q8IV35 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
WDR49Q8IV35 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.37■□□□□ 0.37
WDR49Q8IV35 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.37■□□□□ 0.37
WDR49Q8IV35 MIR943-201ENST00000401286 94 ntBASIC17.37■□□□□ 0.37
WDR49Q8IV35 AL080243.2-201ENST00000418783 582 ntBASIC17.37■□□□□ 0.37
WDR49Q8IV35 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.37■□□□□ 0.37
WDR49Q8IV35 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.37■□□□□ 0.37
WDR49Q8IV35 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
WDR49Q8IV35 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.37■□□□□ 0.37
WDR49Q8IV35 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
WDR49Q8IV35 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
WDR49Q8IV35 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
WDR49Q8IV35 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
WDR49Q8IV35 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
WDR49Q8IV35 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
WDR49Q8IV35 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
WDR49Q8IV35 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
WDR49Q8IV35 KRT8P12-202ENST00000472924 1397 ntBASIC17.37■□□□□ 0.37
WDR49Q8IV35 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
WDR49Q8IV35 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
WDR49Q8IV35 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
WDR49Q8IV35 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 CROCCP1-201ENST00000426910 5675 ntBASIC17.36■□□□□ 0.37
WDR49Q8IV35 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 TREML5P-201ENST00000421694 576 ntBASIC17.36■□□□□ 0.37
WDR49Q8IV35 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 AC027796.2-201ENST00000575326 344 ntBASIC17.36■□□□□ 0.37
WDR49Q8IV35 AL138828.2-201ENST00000615812 383 ntBASIC17.36■□□□□ 0.37
WDR49Q8IV35 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 KRT8P37-201ENST00000451609 1420 ntBASIC17.36■□□□□ 0.37
WDR49Q8IV35 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.36■□□□□ 0.37
WDR49Q8IV35 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WDR49Q8IV35 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
WDR49Q8IV35 AC112504.1-201ENST00000623415 1841 ntBASIC17.35■□□□□ 0.37
WDR49Q8IV35 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
WDR49Q8IV35 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
WDR49Q8IV35 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
WDR49Q8IV35 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
WDR49Q8IV35 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 RPL37AP1-201ENST00000412502 279 ntBASIC17.35■□□□□ 0.37
WDR49Q8IV35 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
WDR49Q8IV35 AC092580.3-201ENST00000430932 139 ntBASIC17.35■□□□□ 0.37
WDR49Q8IV35 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
WDR49Q8IV35 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.35■□□□□ 0.37
WDR49Q8IV35 AC097493.3-201ENST00000509725 367 ntBASIC17.35■□□□□ 0.37
WDR49Q8IV35 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
WDR49Q8IV35 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
WDR49Q8IV35 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.35■□□□□ 0.37
WDR49Q8IV35 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
WDR49Q8IV35 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WDR49Q8IV35 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
WDR49Q8IV35 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
WDR49Q8IV35 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
WDR49Q8IV35 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms