Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 TSEN15P1-201ENST00000423257 515 ntBASIC15.24■□□□□ 0.03
CCDC71Q8IV32 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 LINC02447-202ENST00000501888 2146 ntBASIC15.24■□□□□ 0.03
CCDC71Q8IV32 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 AC068137.2-201ENST00000605408 478 ntBASIC15.24■□□□□ 0.03
CCDC71Q8IV32 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 AL139400.1-201ENST00000366220 510 ntBASIC15.23■□□□□ 0.03
CCDC71Q8IV32 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 FAM185BP-201ENST00000443595 716 ntBASIC15.23■□□□□ 0.03
CCDC71Q8IV32 AL513480.1-201ENST00000451731 511 ntBASIC15.23■□□□□ 0.03
CCDC71Q8IV32 AP000344.2-201ENST00000512987 629 ntBASIC15.23■□□□□ 0.03
CCDC71Q8IV32 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 AC004449.1-201ENST00000564240 433 ntBASIC15.23■□□□□ 0.03
CCDC71Q8IV32 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 AC092919.2-201ENST00000623631 1645 ntBASIC15.23■□□□□ 0.03
CCDC71Q8IV32 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC71Q8IV32 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms