Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 AC243562.2-201ENST00000561247 970 ntBASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 MTHFR-217ENST00000641820 1569 ntBASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 AC100757.3-201ENST00000622361 1406 ntBASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 AL136982.4-201ENST00000437689 1740 ntBASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 HAUS4P1-201ENST00000406739 1145 ntBASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 RPL37AP1-201ENST00000412502 279 ntBASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 AL512638.1-201ENST00000457493 794 ntBASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 TEX28P1-201ENST00000613479 1221 ntBASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 TEX28P2-201ENST00000617764 1221 ntBASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRTM4Q86VH4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 CYP4F24P-201ENST00000586049 1580 ntBASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 MIR648-201ENST00000385046 94 ntBASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 SPDYE17-201ENST00000412399 783 ntBASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 AL080243.2-201ENST00000418783 582 ntBASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 AL590560.3-201ENST00000623350 461 ntBASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 AL691432.1-201ENST00000596308 1422 ntBASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRTM4Q86VH4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms