Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 RPL13AP25-201ENST00000484130 612 ntBASIC11.06□□□□□ -0.64
CSMD3Q7Z407 MIR4741-201ENST00000579822 90 ntBASIC11.06□□□□□ -0.64
CSMD3Q7Z407 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 AC005622.1-201ENST00000636801 1703 ntBASIC11.06□□□□□ -0.64
CSMD3Q7Z407 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 AC136604.1-201ENST00000418535 575 ntBASIC11.06□□□□□ -0.64
CSMD3Q7Z407 KRT18P64-201ENST00000434946 1219 ntBASIC11.06□□□□□ -0.64
CSMD3Q7Z407 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 MIR7845-201ENST00000618396 99 ntBASIC11.06□□□□□ -0.64
CSMD3Q7Z407 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 AL662844.4-201ENST00000606367 2838 ntBASIC11.06□□□□□ -0.64
CSMD3Q7Z407 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 IGF1-203ENST00000392904 761 ntTSL 5 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 UPF3AP2-201ENST00000457924 1132 ntBASIC11.06□□□□□ -0.64
CSMD3Q7Z407 GATB-213ENST00000515812 1893 ntTSL 5 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 AC120045.2-201ENST00000567334 178 ntBASIC11.06□□□□□ -0.64
CSMD3Q7Z407 AP001063.1-201ENST00000568332 529 ntBASIC11.06□□□□□ -0.64
CSMD3Q7Z407 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC134312.5-201ENST00000568031 1313 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC134915.1-201ENST00000426461 574 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 RN7SL720P-201ENST00000488178 304 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 RN7SL555P-201ENST00000584742 339 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 CYGB-203ENST00000589145 788 ntTSL 3 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC080080.1-201ENST00000625121 2420 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AP001094.4-201ENST00000579008 2176 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC074338.1-201ENST00000416825 156 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 FNTAP2-201ENST00000430308 634 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC104784.1-201ENST00000473096 294 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC022137.2-201ENST00000503482 481 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 SCARNA20.5-201ENST00000516991 142 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 AC138951.2-201ENST00000623455 1161 ntBASIC11.05□□□□□ -0.64
CSMD3Q7Z407 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
CSMD3Q7Z407 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms