Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 DFFBP1-201ENST00000433250 979 ntBASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 AL353779.1-201ENST00000434793 351 ntBASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 TP53TG3HP-202ENST00000569755 579 ntBASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 AC027307.3-201ENST00000594262 1100 ntBASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 CHCHD2P3-201ENST00000603038 451 ntBASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
UBE3BQ7Z3V4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.08■□□□□ 0.8
UBE3BQ7Z3V4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
UBE3BQ7Z3V4 PCDH8P1-201ENST00000428983 2773 ntBASIC20.08■□□□□ 0.8
UBE3BQ7Z3V4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBE3BQ7Z3V4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBE3BQ7Z3V4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBE3BQ7Z3V4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBE3BQ7Z3V4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBE3BQ7Z3V4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBE3BQ7Z3V4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 AC140912.1-201ENST00000577171 1054 ntBASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 AC074044.1-201ENST00000609673 707 ntBASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.07■□□□□ 0.8
UBE3BQ7Z3V4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 AC093004.1-201ENST00000508850 424 ntBASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 AC023310.3-201ENST00000557027 670 ntBASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 AC100756.1-201ENST00000562736 682 ntBASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 AC138749.3-201ENST00000567691 622 ntBASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 AC116165.1-201ENST00000611806 668 ntBASIC20.06■□□□□ 0.8
UBE3BQ7Z3V4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms