Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC022188.1-201ENST00000620960 1664 ntBASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 SPDYE14P-201ENST00000442619 822 ntBASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 AC026150.2-201ENST00000564693 1156 ntBASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 AL365330.1-201ENST00000607459 531 ntBASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD3Q7Z3D4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 HMGN1P19-201ENST00000436976 333 ntBASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 AC109322.1-201ENST00000524499 1264 ntBASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 AC061975.2-201ENST00000581722 295 ntBASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 LINC00628-201ENST00000628516 1289 ntBASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD3Q7Z3D4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD3Q7Z3D4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms