Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC107918.2-201ENST00000530817 355 ntBASIC14.72□□□□□ -0.05
SHFQ7M4L6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 AC005622.1-201ENST00000636801 1703 ntBASIC14.72□□□□□ -0.05
SHFQ7M4L6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 MIR648-201ENST00000385046 94 ntBASIC14.71□□□□□ -0.05
SHFQ7M4L6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 AC020765.3-201ENST00000613051 740 ntBASIC14.71□□□□□ -0.05
SHFQ7M4L6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SHFQ7M4L6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
SHFQ7M4L6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SHFQ7M4L6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
SHFQ7M4L6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SHFQ7M4L6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.71□□□□□ -0.06
SHFQ7M4L6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SHFQ7M4L6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SHFQ7M4L6 SSR4P1-203ENST00000599569 2260 ntBASIC14.71□□□□□ -0.06
SHFQ7M4L6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
SHFQ7M4L6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SHFQ7M4L6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
SHFQ7M4L6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 AL161772.1-201ENST00000610494 4412 ntBASIC14.7□□□□□ -0.06
SHFQ7M4L6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 TCAF2P1-201ENST00000291129 2421 ntBASIC14.7□□□□□ -0.06
SHFQ7M4L6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 AC073648.2-201ENST00000510116 352 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms