Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 AC002347.1-201ENST00000569543 541 ntBASIC14.79□□□□□ -0.04
NIPAL3Q6P499 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 AC022532.1-201ENST00000624563 1728 ntBASIC14.79□□□□□ -0.04
NIPAL3Q6P499 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.79□□□□□ -0.04
NIPAL3Q6P499 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 AC092919.2-201ENST00000623631 1645 ntBASIC14.78□□□□□ -0.04
NIPAL3Q6P499 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 PMS2P4-201ENST00000412466 1052 ntBASIC14.78□□□□□ -0.04
NIPAL3Q6P499 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 AC140658.5-201ENST00000438532 169 ntBASIC14.78□□□□□ -0.04
NIPAL3Q6P499 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 PGAM5P1-201ENST00000518923 814 ntBASIC14.78□□□□□ -0.04
NIPAL3Q6P499 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 AC021097.1-201ENST00000607902 574 ntBASIC14.78□□□□□ -0.04
NIPAL3Q6P499 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
NIPAL3Q6P499 AC073347.1-201ENST00000421633 2643 ntBASIC14.78□□□□□ -0.04
NIPAL3Q6P499 DBET-201ENST00000630918 3363 ntBASIC14.77□□□□□ -0.04
NIPAL3Q6P499 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.77□□□□□ -0.04
NIPAL3Q6P499 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms