Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 HTR5BP-201ENST00000430851 1154 ntBASIC19.36■□□□□ 0.69
RNF20Q5VTR2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 AC243562.1-201ENST00000560672 389 ntBASIC19.36■□□□□ 0.69
RNF20Q5VTR2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 AL671883.3-201ENST00000603274 991 ntBASIC19.36■□□□□ 0.69
RNF20Q5VTR2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 DNAJB3-201ENST00000446806 729 ntBASIC19.35■□□□□ 0.69
RNF20Q5VTR2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 IGHV3-62-201ENST00000520057 340 ntBASIC19.35■□□□□ 0.69
RNF20Q5VTR2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 KRT8P23-201ENST00000560090 1207 ntBASIC19.35■□□□□ 0.69
RNF20Q5VTR2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF20Q5VTR2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 AC142381.1-201ENST00000426099 345 ntBASIC19.34■□□□□ 0.69
RNF20Q5VTR2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 AC079140.1-201ENST00000508039 487 ntBASIC19.34■□□□□ 0.69
RNF20Q5VTR2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 FOXO1B-201ENST00000504678 1527 ntBASIC19.34■□□□□ 0.69
RNF20Q5VTR2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF20Q5VTR2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms