Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 AL589182.2-201ENST00000619332 1049 ntBASIC15.69■□□□□ 0.1
RNF220Q5VTB9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 AL355877.3-201ENST00000622820 899 ntBASIC15.69■□□□□ 0.1
RNF220Q5VTB9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 LINC00552-201ENST00000625151 2579 ntBASIC15.69■□□□□ 0.1
RNF220Q5VTB9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 AC136621.1-201ENST00000624017 2304 ntBASIC15.68■□□□□ 0.1
RNF220Q5VTB9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 TSPY19P-201ENST00000418461 509 ntBASIC15.68■□□□□ 0.1
RNF220Q5VTB9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 TSPY18P-201ENST00000441642 509 ntBASIC15.68■□□□□ 0.1
RNF220Q5VTB9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 AL109954.1-202ENST00000564051 2148 ntBASIC15.68■□□□□ 0.1
RNF220Q5VTB9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF220Q5VTB9 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 AC243591.1-201ENST00000452967 1364 ntBASIC15.67■□□□□ 0.1
RNF220Q5VTB9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF220Q5VTB9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms