Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB6CQ53S08 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB6CQ53S08 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.81■□□□□ 0.28
RAB6CQ53S08 MIR4453-201ENST00000584019 89 ntBASIC16.81■□□□□ 0.28
RAB6CQ53S08 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB6CQ53S08 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.81■□□□□ 0.28
RAB6CQ53S08 AC006538.3-201ENST00000612495 578 ntBASIC16.81■□□□□ 0.28
RAB6CQ53S08 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
RAB6CQ53S08 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB6CQ53S08 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB6CQ53S08 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB6CQ53S08 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB6CQ53S08 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB6CQ53S08 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB6CQ53S08 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB6CQ53S08 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB6CQ53S08 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB6CQ53S08 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB6CQ53S08 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB6CQ53S08 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB6CQ53S08 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB6CQ53S08 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB6CQ53S08 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB6CQ53S08 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 AP005117.1-202ENST00000581724 1908 ntBASIC16.8■□□□□ 0.28
RAB6CQ53S08 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB6CQ53S08 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB6CQ53S08 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB6CQ53S08 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 AC245100.5-201ENST00000452108 331 ntBASIC16.8■□□□□ 0.28
RAB6CQ53S08 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 AC024267.1-201ENST00000582320 895 ntBASIC16.8■□□□□ 0.28
RAB6CQ53S08 AC018529.1-201ENST00000613063 361 ntBASIC16.8■□□□□ 0.28
RAB6CQ53S08 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.8■□□□□ 0.28
RAB6CQ53S08 LINC00628-201ENST00000628516 1289 ntBASIC16.8■□□□□ 0.28
RAB6CQ53S08 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB6CQ53S08 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB6CQ53S08 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB6CQ53S08 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB6CQ53S08 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB6CQ53S08 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 TSEN15P1-201ENST00000423257 515 ntBASIC16.79■□□□□ 0.28
RAB6CQ53S08 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 HLA-J-203ENST00000494367 1087 ntBASIC16.79■□□□□ 0.28
RAB6CQ53S08 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 AC003101.2-201ENST00000612557 442 ntBASIC16.79■□□□□ 0.28
RAB6CQ53S08 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.79■□□□□ 0.28
RAB6CQ53S08 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB6CQ53S08 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB6CQ53S08 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB6CQ53S08 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB6CQ53S08 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms