Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 SPDYE17-201ENST00000412399 783 ntBASIC19.44■□□□□ 0.7
RFX7Q2KHR2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 RN7SL692P-201ENST00000464677 288 ntBASIC19.44■□□□□ 0.7
RFX7Q2KHR2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 AL596325.1-201ENST00000563991 1082 ntBASIC19.44■□□□□ 0.7
RFX7Q2KHR2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 OR6D1P-202ENST00000641007 5290 ntBASIC19.44■□□□□ 0.7
RFX7Q2KHR2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 API5-211ENST00000534695 560 ntTSL 5 BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.44■□□□□ 0.7
RFX7Q2KHR2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX7Q2KHR2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 AC063926.2-201ENST00000623766 1308 ntBASIC19.43■□□□□ 0.7
RFX7Q2KHR2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 AC134407.2-201ENST00000625089 1978 ntBASIC19.43■□□□□ 0.7
RFX7Q2KHR2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 BTBD7P1-201ENST00000447253 1453 ntBASIC19.43■□□□□ 0.7
RFX7Q2KHR2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 MEIS3P1-201ENST00000495167 958 ntBASIC19.43■□□□□ 0.7
RFX7Q2KHR2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RFX7Q2KHR2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 BNIP3P1-202ENST00000550043 1585 ntBASIC19.42■□□□□ 0.7
RFX7Q2KHR2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 RN7SL618P-201ENST00000477850 296 ntBASIC19.42■□□□□ 0.7
RFX7Q2KHR2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms