Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PDS5AQ29RF7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 AC124067.4-201ENST00000519691 2379 ntBASIC19.24■□□□□ 0.67
PDS5AQ29RF7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PDS5AQ29RF7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 CTBP2P3-201ENST00000585629 1255 ntBASIC19.23■□□□□ 0.67
PDS5AQ29RF7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 IGHV3-72-202ENST00000621503 303 ntBASIC19.23■□□□□ 0.67
PDS5AQ29RF7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PDS5AQ29RF7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 KRT17P7-201ENST00000451704 1104 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms