Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
COL16A1Q07092 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.28■■□□□ 1
COL16A1Q07092 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
COL16A1Q07092 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL16A1Q07092 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL16A1Q07092 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL16A1Q07092 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC21.27■■□□□ 1
COL16A1Q07092 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
COL16A1Q07092 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL16A1Q07092 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
COL16A1Q07092 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL16A1Q07092 AC011742.3-201ENST00000439053 820 ntBASIC21.27■■□□□ 1
COL16A1Q07092 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC21.27■■□□□ 1
COL16A1Q07092 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC21.27■■□□□ 1
COL16A1Q07092 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC21.27■■□□□ 1
COL16A1Q07092 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC21.27■■□□□ 1
COL16A1Q07092 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL16A1Q07092 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC21.27■■□□□ 1
COL16A1Q07092 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL16A1Q07092 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC21.27■■□□□ 1
COL16A1Q07092 AL353770.1-201ENST00000614915 403 ntBASIC21.27■■□□□ 1
COL16A1Q07092 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC21.27■■□□□ 1
COL16A1Q07092 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC21.27■■□□□ 1
COL16A1Q07092 RPL35-206ENST00000629845 340 ntTSL 5 BASIC21.27■■□□□ 1
COL16A1Q07092 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL16A1Q07092 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL16A1Q07092 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL16A1Q07092 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL16A1Q07092 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
COL16A1Q07092 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL16A1Q07092 HIST2H2BB-201ENST00000449108 381 ntBASIC21.26■□□□□ 0.99
COL16A1Q07092 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC21.26■□□□□ 0.99
COL16A1Q07092 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
COL16A1Q07092 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL16A1Q07092 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC21.26■□□□□ 0.99
COL16A1Q07092 SYT17-208ENST00000568433 812 ntTSL 3 BASIC21.26■□□□□ 0.99
COL16A1Q07092 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL16A1Q07092 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
COL16A1Q07092 AP001002.3-201ENST00000623482 206 ntBASIC21.26■□□□□ 0.99
COL16A1Q07092 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL16A1Q07092 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
COL16A1Q07092 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL16A1Q07092 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL16A1Q07092 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
COL16A1Q07092 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.26■□□□□ 0.99
COL16A1Q07092 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL16A1Q07092 DPM3-202ENST00000368399 517 ntBASIC21.26■□□□□ 0.99
COL16A1Q07092 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL16A1Q07092 AL133267.1-201ENST00000398220 340 ntBASIC21.26■□□□□ 0.99
COL16A1Q07092 KLF2P2-201ENST00000416807 1039 ntBASIC21.26■□□□□ 0.99
COL16A1Q07092 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL16A1Q07092 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
COL16A1Q07092 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC21.26■□□□□ 0.99
COL16A1Q07092 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC21.26■□□□□ 0.99
COL16A1Q07092 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.25■□□□□ 0.99
COL16A1Q07092 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL16A1Q07092 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL16A1Q07092 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.25■□□□□ 0.99
COL16A1Q07092 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
COL16A1Q07092 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL16A1Q07092 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL16A1Q07092 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC21.25■□□□□ 0.99
COL16A1Q07092 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
COL16A1Q07092 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC21.25■□□□□ 0.99
COL16A1Q07092 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL16A1Q07092 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
COL16A1Q07092 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL16A1Q07092 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL16A1Q07092 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL16A1Q07092 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
COL16A1Q07092 AC097065.1-201ENST00000425737 517 ntBASIC21.25■□□□□ 0.99
COL16A1Q07092 RGS5-214ENST00000429865 754 ntTSL 3 BASIC21.25■□□□□ 0.99
COL16A1Q07092 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC21.25■□□□□ 0.99
COL16A1Q07092 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL16A1Q07092 AC005740.2-201ENST00000511085 419 ntBASIC21.25■□□□□ 0.99
COL16A1Q07092 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC21.25■□□□□ 0.99
COL16A1Q07092 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
COL16A1Q07092 AC025181.2-201ENST00000606994 802 ntBASIC21.25■□□□□ 0.99
COL16A1Q07092 AL136301.1-201ENST00000615830 422 ntBASIC21.25■□□□□ 0.99
COL16A1Q07092 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
COL16A1Q07092 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL16A1Q07092 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC21.25■□□□□ 0.99
COL16A1Q07092 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.25■□□□□ 0.99
COL16A1Q07092 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL16A1Q07092 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL16A1Q07092 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
COL16A1Q07092 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL16A1Q07092 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
COL16A1Q07092 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL16A1Q07092 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
COL16A1Q07092 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL16A1Q07092 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL16A1Q07092 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL16A1Q07092 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL16A1Q07092 AC026316.1-201ENST00000398900 414 ntBASIC21.24■□□□□ 0.99
COL16A1Q07092 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC21.24■□□□□ 0.99
COL16A1Q07092 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC21.24■□□□□ 0.99
COL16A1Q07092 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC21.24■□□□□ 0.99
COL16A1Q07092 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms