Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
SSBP1Q04837 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SSBP1Q04837 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.74□□□□□ -0.21
SSBP1Q04837 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.74□□□□□ -0.21
SSBP1Q04837 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.74□□□□□ -0.21
SSBP1Q04837 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SSBP1Q04837 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.74□□□□□ -0.21
SSBP1Q04837 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 AGAP7P-201ENST00000582299 2062 ntBASIC13.74□□□□□ -0.21
SSBP1Q04837 AGAP14-201ENST00000624701 2060 ntBASIC13.74□□□□□ -0.21
SSBP1Q04837 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.74□□□□□ -0.21
SSBP1Q04837 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 AP001282.1-201ENST00000531301 1499 ntBASIC13.74□□□□□ -0.21
SSBP1Q04837 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.73□□□□□ -0.21
SSBP1Q04837 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.73□□□□□ -0.21
SSBP1Q04837 KRT8P44-201ENST00000441609 1350 ntBASIC13.73□□□□□ -0.21
SSBP1Q04837 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.73□□□□□ -0.21
SSBP1Q04837 AC129492.6-201ENST00000611383 1305 ntBASIC13.73□□□□□ -0.21
SSBP1Q04837 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SSBP1Q04837 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SSBP1Q04837 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.73□□□□□ -0.21
SSBP1Q04837 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.73□□□□□ -0.21
SSBP1Q04837 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SSBP1Q04837 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 DRAXINP1-201ENST00000437611 948 ntBASIC13.73□□□□□ -0.21
SSBP1Q04837 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 AC107918.2-201ENST00000530817 355 ntBASIC13.73□□□□□ -0.21
SSBP1Q04837 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
SSBP1Q04837 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SSBP1Q04837 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SSBP1Q04837 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.73□□□□□ -0.21
SSBP1Q04837 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP1Q04837 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SSBP1Q04837 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP1Q04837 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms