Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEP78395 MIR940-201ENST00000401276 94 ntBASIC16.41■□□□□ 0.22
PRAMEP78395 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEP78395 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEP78395 AP002472.1-201ENST00000577490 586 ntBASIC16.41■□□□□ 0.22
PRAMEP78395 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEP78395 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEP78395 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEP78395 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEP78395 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEP78395 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEP78395 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEP78395 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEP78395 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEP78395 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEP78395 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEP78395 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEP78395 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEP78395 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEP78395 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEP78395 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEP78395 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEP78395 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEP78395 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRAMEP78395 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEP78395 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEP78395 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRAMEP78395 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEP78395 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEP78395 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEP78395 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEP78395 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEP78395 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEP78395 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.4■□□□□ 0.22
PRAMEP78395 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEP78395 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEP78395 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEP78395 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.4■□□□□ 0.22
PRAMEP78395 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEP78395 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.4■□□□□ 0.22
PRAMEP78395 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEP78395 AC093724.1-201ENST00000448659 1027 ntBASIC16.4■□□□□ 0.22
PRAMEP78395 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEP78395 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEP78395 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEP78395 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PRAMEP78395 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEP78395 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEP78395 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEP78395 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEP78395 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEP78395 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PRAMEP78395 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.39■□□□□ 0.21
PRAMEP78395 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.39■□□□□ 0.21
PRAMEP78395 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.39■□□□□ 0.21
PRAMEP78395 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.39■□□□□ 0.21
PRAMEP78395 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PRAMEP78395 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 AL022342.1-201ENST00000400363 863 ntBASIC16.39■□□□□ 0.21
PRAMEP78395 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.39■□□□□ 0.21
PRAMEP78395 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PRAMEP78395 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.39■□□□□ 0.21
PRAMEP78395 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.39■□□□□ 0.21
PRAMEP78395 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 AC024909.3-201ENST00000611513 2257 ntBASIC16.39■□□□□ 0.21
PRAMEP78395 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.39■□□□□ 0.21
PRAMEP78395 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEP78395 AC073439.1-201ENST00000624121 1774 ntBASIC16.38■□□□□ 0.21
PRAMEP78395 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms