Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.56■□□□□ 0.4
PDE6CP51160 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6CP51160 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDE6CP51160 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.56■□□□□ 0.4
PDE6CP51160 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.56■□□□□ 0.4
PDE6CP51160 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PDE6CP51160 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 AL592424.1-201ENST00000563624 1536 ntBASIC17.56■□□□□ 0.4
PDE6CP51160 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PDE6CP51160 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.56■□□□□ 0.4
PDE6CP51160 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
PDE6CP51160 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6CP51160 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6CP51160 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDE6CP51160 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 AC016027.1-202ENST00000607927 1699 ntBASIC17.55■□□□□ 0.4
PDE6CP51160 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDE6CP51160 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6CP51160 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.55■□□□□ 0.4
PDE6CP51160 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PDE6CP51160 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PDE6CP51160 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDE6CP51160 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PDE6CP51160 TFAMP1-201ENST00000412727 736 ntBASIC17.55■□□□□ 0.4
PDE6CP51160 AC092474.2-201ENST00000424288 719 ntBASIC17.55■□□□□ 0.4
PDE6CP51160 RFPL4AP1-201ENST00000530883 850 ntBASIC17.55■□□□□ 0.4
PDE6CP51160 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
PDE6CP51160 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.55■□□□□ 0.4
PDE6CP51160 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PDE6CP51160 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
PDE6CP51160 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.55■□□□□ 0.4
PDE6CP51160 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6CP51160 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6CP51160 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.55■□□□□ 0.4
PDE6CP51160 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDE6CP51160 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6CP51160 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6CP51160 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDE6CP51160 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PDE6CP51160 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.54■□□□□ 0.4
PDE6CP51160 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6CP51160 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6CP51160 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.54■□□□□ 0.4
PDE6CP51160 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.54■□□□□ 0.4
PDE6CP51160 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6CP51160 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.54■□□□□ 0.4
PDE6CP51160 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.54■□□□□ 0.4
PDE6CP51160 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PDE6CP51160 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.54■□□□□ 0.4
PDE6CP51160 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.54■□□□□ 0.4
PDE6CP51160 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6CP51160 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PDE6CP51160 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
PDE6CP51160 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.54■□□□□ 0.4
PDE6CP51160 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.54■□□□□ 0.4
PDE6CP51160 AC004449.1-201ENST00000564240 433 ntBASIC17.54■□□□□ 0.4
PDE6CP51160 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.54■□□□□ 0.4
PDE6CP51160 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PDE6CP51160 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
PDE6CP51160 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.54■□□□□ 0.4
PDE6CP51160 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6CP51160 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6CP51160 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDE6CP51160 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6CP51160 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6CP51160 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6CP51160 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PDE6CP51160 AC024909.3-201ENST00000611513 2257 ntBASIC17.53■□□□□ 0.4
PDE6CP51160 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6CP51160 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms