Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRCC3P46736 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BRCC3P46736 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRCC3P46736 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.16■□□□□ 0.34
BRCC3P46736 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRCC3P46736 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
BRCC3P46736 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.16■□□□□ 0.34
BRCC3P46736 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.16■□□□□ 0.34
BRCC3P46736 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
BRCC3P46736 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
BRCC3P46736 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
BRCC3P46736 BNIP3P1-202ENST00000550043 1585 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.15■□□□□ 0.34
BRCC3P46736 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
BRCC3P46736 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.15■□□□□ 0.34
BRCC3P46736 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.15■□□□□ 0.34
BRCC3P46736 AC004987.2-201ENST00000395959 1148 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 DGCR5-201ENST00000399539 862 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 COX5BP8-201ENST00000416911 349 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 NME2P1-201ENST00000426182 414 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 AC245100.5-201ENST00000452108 331 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.15■□□□□ 0.34
BRCC3P46736 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.15■□□□□ 0.34
BRCC3P46736 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.15■□□□□ 0.34
BRCC3P46736 AC023310.3-201ENST00000557027 670 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 AC243562.2-201ENST00000561247 970 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 AC100756.1-201ENST00000562736 682 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 WASH4P-201ENST00000564273 1246 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 AC138749.3-201ENST00000567691 622 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.15■□□□□ 0.34
BRCC3P46736 AC116165.1-201ENST00000611806 668 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.15■□□□□ 0.34
BRCC3P46736 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
BRCC3P46736 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.15■□□□□ 0.34
BRCC3P46736 AL358472.5-202ENST00000641448 1267 ntBASIC17.15■□□□□ 0.34
BRCC3P46736 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
BRCC3P46736 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
BRCC3P46736 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRCC3P46736 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
BRCC3P46736 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCC3P46736 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCC3P46736 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
BRCC3P46736 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.14■□□□□ 0.33
BRCC3P46736 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.14■□□□□ 0.33
BRCC3P46736 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.14■□□□□ 0.33
BRCC3P46736 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCC3P46736 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.14■□□□□ 0.33
BRCC3P46736 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCC3P46736 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
BRCC3P46736 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.14■□□□□ 0.33
BRCC3P46736 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.14■□□□□ 0.33
BRCC3P46736 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRCC3P46736 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.14■□□□□ 0.33
BRCC3P46736 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.14■□□□□ 0.33
BRCC3P46736 AC093004.1-201ENST00000508850 424 ntBASIC17.14■□□□□ 0.33
BRCC3P46736 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.14■□□□□ 0.33
BRCC3P46736 TPRX2P-201ENST00000535362 881 ntBASIC17.14■□□□□ 0.33
BRCC3P46736 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRCC3P46736 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.14■□□□□ 0.33
BRCC3P46736 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.14■□□□□ 0.33
BRCC3P46736 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
BRCC3P46736 AC092364.2-201ENST00000596710 2692 ntBASIC17.14■□□□□ 0.33
BRCC3P46736 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
BRCC3P46736 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.14■□□□□ 0.33
BRCC3P46736 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
BRCC3P46736 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.14■□□□□ 0.33
BRCC3P46736 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRCC3P46736 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.14■□□□□ 0.33
BRCC3P46736 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCC3P46736 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.14■□□□□ 0.33
BRCC3P46736 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCC3P46736 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCC3P46736 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRCC3P46736 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.14■□□□□ 0.33
BRCC3P46736 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 KRT8P37-201ENST00000451609 1420 ntBASIC17.13■□□□□ 0.33
BRCC3P46736 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 PCDHA14-201ENST00000506751 2298 ntBASIC17.13■□□□□ 0.33
BRCC3P46736 AL662844.4-201ENST00000606367 2838 ntBASIC17.13■□□□□ 0.33
BRCC3P46736 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BRCC3P46736 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRCC3P46736 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms