Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.83■□□□□ 0.44
RFC5P40937 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC5P40937 AL512361.1-201ENST00000554200 418 ntBASIC17.83■□□□□ 0.44
RFC5P40937 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.83■□□□□ 0.44
RFC5P40937 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.83■□□□□ 0.44
RFC5P40937 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC5P40937 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC5P40937 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.83■□□□□ 0.44
RFC5P40937 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC5P40937 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC5P40937 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC5P40937 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC5P40937 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC5P40937 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RFC5P40937 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC5P40937 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RFC5P40937 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC5P40937 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC5P40937 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC5P40937 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC5P40937 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC5P40937 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC5P40937 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC5P40937 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.82■□□□□ 0.44
RFC5P40937 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC5P40937 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC5P40937 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RFC5P40937 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC5P40937 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC5P40937 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC5P40937 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.82■□□□□ 0.44
RFC5P40937 EEF1DP4-201ENST00000446006 880 ntBASIC17.82■□□□□ 0.44
RFC5P40937 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.82■□□□□ 0.44
RFC5P40937 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.82■□□□□ 0.44
RFC5P40937 RN7SL204P-201ENST00000582831 262 ntBASIC17.82■□□□□ 0.44
RFC5P40937 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.82■□□□□ 0.44
RFC5P40937 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RFC5P40937 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC5P40937 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.82■□□□□ 0.44
RFC5P40937 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.82■□□□□ 0.44
RFC5P40937 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.82■□□□□ 0.44
RFC5P40937 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RFC5P40937 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC5P40937 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.82■□□□□ 0.44
RFC5P40937 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC5P40937 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC5P40937 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC5P40937 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
RFC5P40937 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RFC5P40937 BTBD7P1-201ENST00000447253 1453 ntBASIC17.82■□□□□ 0.44
RFC5P40937 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.82■□□□□ 0.44
RFC5P40937 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 PCDH8P1-201ENST00000428983 2773 ntBASIC17.81■□□□□ 0.44
RFC5P40937 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
RFC5P40937 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
RFC5P40937 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.81■□□□□ 0.44
RFC5P40937 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.81■□□□□ 0.44
RFC5P40937 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RFC5P40937 MIR648-201ENST00000385046 94 ntBASIC17.81■□□□□ 0.44
RFC5P40937 AC236430.1-201ENST00000402231 743 ntBASIC17.81■□□□□ 0.44
RFC5P40937 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 AC002472.2-201ENST00000442739 958 ntBASIC17.81■□□□□ 0.44
RFC5P40937 SERPINA7P1-201ENST00000443077 631 ntBASIC17.81■□□□□ 0.44
RFC5P40937 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RFC5P40937 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.81■□□□□ 0.44
RFC5P40937 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 AC009118.2-201ENST00000613275 655 ntBASIC17.81■□□□□ 0.44
RFC5P40937 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.81■□□□□ 0.44
RFC5P40937 MTHFR-217ENST00000641820 1569 ntBASIC17.81■□□□□ 0.44
RFC5P40937 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.81■□□□□ 0.44
RFC5P40937 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.81■□□□□ 0.44
RFC5P40937 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RFC5P40937 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RFC5P40937 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RFC5P40937 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RFC5P40937 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC5P40937 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RFC5P40937 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.81■□□□□ 0.44
RFC5P40937 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RFC5P40937 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC5P40937 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC5P40937 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC5P40937 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFC5P40937 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFC5P40937 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFC5P40937 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms