Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.74■□□□□ 0.27
PTPN7P35236 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN7P35236 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTPN7P35236 AL591424.1-201ENST00000442569 1213 ntBASIC16.74■□□□□ 0.27
PTPN7P35236 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.74■□□□□ 0.27
PTPN7P35236 AL138918.1-201ENST00000568306 659 ntBASIC16.74■□□□□ 0.27
PTPN7P35236 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.74■□□□□ 0.27
PTPN7P35236 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN7P35236 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
PTPN7P35236 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN7P35236 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
PTPN7P35236 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN7P35236 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN7P35236 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PTPN7P35236 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN7P35236 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PTPN7P35236 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN7P35236 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PTPN7P35236 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN7P35236 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN7P35236 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN7P35236 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN7P35236 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PTPN7P35236 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN7P35236 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
PTPN7P35236 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
PTPN7P35236 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN7P35236 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN7P35236 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN7P35236 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN7P35236 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN7P35236 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN7P35236 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN7P35236 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN7P35236 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
PTPN7P35236 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN7P35236 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN7P35236 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN7P35236 PPT1-215ENST00000641471 2368 ntBASIC16.72■□□□□ 0.27
PTPN7P35236 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PTPN7P35236 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PTPN7P35236 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PTPN7P35236 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN7P35236 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN7P35236 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN7P35236 AC134407.2-201ENST00000625089 1978 ntBASIC16.72■□□□□ 0.27
PTPN7P35236 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN7P35236 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN7P35236 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN7P35236 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.72■□□□□ 0.27
PTPN7P35236 FDX1P1-201ENST00000449115 551 ntBASIC16.72■□□□□ 0.27
PTPN7P35236 RNA5SP416-201ENST00000516838 111 ntBASIC16.72■□□□□ 0.27
PTPN7P35236 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN7P35236 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN7P35236 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.72■□□□□ 0.27
PTPN7P35236 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPN7P35236 AC024267.1-201ENST00000582320 895 ntBASIC16.72■□□□□ 0.27
PTPN7P35236 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPN7P35236 SPTSSB-204ENST00000617024 1292 ntBASIC16.72■□□□□ 0.27
PTPN7P35236 BX640515.1-201ENST00000617215 977 ntBASIC16.72■□□□□ 0.27
PTPN7P35236 AC092865.6-201ENST00000642101 219 ntBASIC16.72■□□□□ 0.27
PTPN7P35236 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN7P35236 TMBIM7P-203ENST00000641617 1718 ntBASIC16.72■□□□□ 0.27
PTPN7P35236 ZNF259P1-201ENST00000407656 1365 ntBASIC16.72■□□□□ 0.27
PTPN7P35236 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTPN7P35236 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN7P35236 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN7P35236 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN7P35236 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTPN7P35236 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms